Tagged Questions

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Tips on compiling and using MEME 4.3 with a Sun Grid Engine computation cluster

Has anyone compiled and used MEME 4.x for use in a parallel computation environment, based upon operation with a Sun Grid Engine (SGE) cluster? I can compile the suite and its tes …
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7answers
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Finding common motifs in sequences

I have a few hundred yeast sequences (20-80bp long) and I want to find common motifs (conserved bases at certain indices) in them. I am using a Mac